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study importer

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This commit is contained in:
Dr Masroor Ehsan 2024-12-30 10:10:45 +06:00
parent 62f030a05b
commit ec50e81d4d
1 changed files with 62 additions and 43 deletions
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105
app/Services/Pacs/StudyImporter.php
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@ -4,6 +4,7 @@
use App\Models\Enums\StudyLevelStatus;
use App\Models\Study;
use App\Models\StudyDetails;
use Carbon\Carbon;
use Illuminate\Support\Facades\DB;
@ -82,74 +83,92 @@ public function importStudies()
}
}
private function prepareData(mixed $study): array
private function prepareData(mixed $orthanc_src): array
{
$inst_name = data_get($study, 'MainDicomTags.InstitutionName');
$inst_name = data_get($orthanc_src, 'MainDicomTags.InstitutionName');
$inst_id = InstituteMapper::map($inst_name);
$data = [
'orthanc_uid' => strtolower($study['ID']),
$study = [
'orthanc_uid' => strtolower($orthanc_src['ID']),
'is_locked' => false,
'is_active' => true,
'institution_name' => $inst_name,
'institute_id' => $inst_id,
'patient_uid' => $study['ParentPatient'],
'patient_id' => data_get($study, 'PatientMainDicomTags.PatientID'),
'patient_name' => data_get($study, 'PatientMainDicomTags.PatientName'),
'patient_sex' => data_get($study, 'PatientMainDicomTags.PatientSex'),
'patient_uid' => $orthanc_src['ParentPatient'],
'patient_id' => data_get($orthanc_src, 'PatientMainDicomTags.PatientID'),
'patient_name' => data_get($orthanc_src, 'PatientMainDicomTags.PatientName'),
'patient_sex' => data_get($orthanc_src, 'PatientMainDicomTags.PatientSex'),
'accession_number' => data_get($study, 'MainDicomTags.AccessionNumber'),
'referring_physician_name' => data_get($study, 'MainDicomTags.ReferringPhysicianName'),
'study_id' => data_get($study, 'MainDicomTags.StudyID'),
'study_instance_uid' => data_get($study, 'MainDicomTags.StudyInstanceUID'),
'study_date' => DicomUtils::dateTimeToCarbon($study['MainDicomTags']['StudyDate'], $study['MainDicomTags']['StudyTime']),
'receive_date' => Carbon::parse($study['LastUpdate'], 'UTC'),
'accession_number' => data_get($orthanc_src, 'MainDicomTags.AccessionNumber'),
'referring_physician_name' => data_get($orthanc_src, 'MainDicomTags.ReferringPhysicianName'),
'study_id' => data_get($orthanc_src, 'MainDicomTags.StudyID'),
'study_instance_uid' => data_get($orthanc_src, 'MainDicomTags.StudyInstanceUID'),
'study_modality' => data_get($orthanc_src, 'RequestedTags.Modality'),
'body_part_examined' => data_get($orthanc_src, 'RequestedTags.BodyPartExamined'),
'study_modality' => data_get($study, 'RequestedTags.Modality'),
'body_part_examined' => data_get($study, 'RequestedTags.BodyPartExamined'),
'study_date' => DicomUtils::dateTimeToCarbon($orthanc_src['MainDicomTags']['StudyDate'], $orthanc_src['MainDicomTags']['StudyTime']),
'receive_date' => Carbon::parse($orthanc_src['LastUpdate'], 'UTC'),
'image_count' => data_get($orthanc_src, 'Statistics.CountInstances'),
'series_count' => data_get($orthanc_src, 'Statistics.CountSeries'),
'disk_size' => data_get($orthanc_src, 'Statistics.DiskSize'),
];
if ((bool) $orthanc_src['IsStable']) {
$study['study_status'] = StudyLevelStatus::StudyArrived->value;
} else {
$study['study_status'] = StudyLevelStatus::Pending->value;
}
$dob = data_get($orthanc_src, 'PatientMainDicomTags.PatientBirthDate');
if (filled($dob)) {
$study['patient_birthdate'] = Carbon::parse($dob);
}
$descr = data_get($orthanc_src, 'MainDicomTags.StudyDescription');
if (blank($descr)) {
$descr = data_get($orthanc_src, 'RequestedTags.AcquisitionDeviceProcessingDescription');
}
$this->setValue($study, 'study_description', trim($descr));
$details = [
'software_versions' => data_get($study, 'RequestedTags.SoftwareVersions'),
'station_name' => data_get($study, 'RequestedTags.StationName'),
'operators_name' => data_get($study, 'RequestedTags.OperatorsName'),
'manufacturer' => data_get($study, 'RequestedTags.Manufacturer'),
'manufacturer_model_name' => data_get($study, 'RequestedTags.ManufacturerModelName'),
'image_count' => data_get($study, 'Statistics.CountInstances'),
'series_count' => data_get($study, 'Statistics.CountSeries'),
'disk_size' => data_get($study, 'Statistics.DiskSize'),
];
if ($study['IsStable']) {
$data['study_status'] = StudyLevelStatus::StudyArrived->value;
} else {
$data['study_status'] = StudyLevelStatus::Pending->value;
}
$study = array_filter($study, fn ($v) => filled($v));
$details = array_filter($details, fn ($v) => filled($v));
$dob = data_get($study, 'PatientMainDicomTags.PatientBirthDate');
if (trim($dob) != '') {
$data['patient_birthdate'] = Carbon::parse($dob);
}
$descr = data_get($study, 'MainDicomTags.StudyDescription');
if ($descr == null) {
$descr = data_get($study, 'RequestedTags.AcquisitionDeviceProcessingDescription');
}
$data['study_description'] = trim($descr);
return $data;
return compact('study', 'details');
}
public function updateStudy(int $row_id, mixed $study): void
private function setValue(array &$array, string $key, mixed $value): void
{
$data = $this->prepareData($study);
unset($data['orthanc_uid']);
Study::where('id', $row_id)->update($data);
if (filled($value)) {
$array[$key] = $value;
}
}
public function insertStudy(mixed $study): void
private function updateStudy(int $row_id, mixed $study): void
{
$data = $this->prepareData($study);
Study::create($data);
unset($data['study']['orthanc_uid']);
DB::table('studies')->where('id', $row_id)->update($data['study']);
if (! empty($data['details'])) {
DB::table('study_details')->where('study_id', $row_id)->update($data['details']);
}
}
private function insertStudy(mixed $study): void
{
$data = $this->prepareData($study);
$study = Study::create($data['study']);
$data['details']['study_id'] = $study->id;
StudyDetails::create($data['details']);
}
}